Klebsiella pneumoniae - SRA

SRX6612800: Klebsiella pneumoniae
1 ILLUMINA (Illumina HiSeq 2500) run: 3.7M spots, 1G bases, 411.1Mb downloads

Design: Nextera XT Library Preparation

Submitted by: Columbia University

Study: Polymyxin resistance in Klebsiella pneumoniae

PRJNA557275 • SRP216778 • All experiments • All runs

Polymyxin resistance (PR) is an emerging threat. We sequenced K. pneumoniae isolates from a single healthcare system from 2011 - 2018. We noted multiplicity of genomic alterations leading to PR in clinical Klebsiella pneumoniae, both within individual patients and isolate clusters. Polymyxin exposure rather than transmission played a key role in spread of PR.

Sample:

SAMN12392872 • SRS5176941 • All experiments • All runs

Organism: Klebsiella pneumoniae

Library:

Name: NR5089

Instrument: Illumina HiSeq 2500

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 3.7M spots, 1G bases, 411.1Mb

Run	# of Spots	# of Bases	Size	Published
SRR9858641	3,665,665	1G	411.1Mb	2019-08-05

ID:: 8720554

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